@misc{oai:ir.soken.ac.jp:00001249, author = {高, 影 and ガオイン and GAO, Ying}, month = {2016-02-17, 2016-02-17}, note = {The iron protoporphyrin IX(b type heme)exists as a reaction center in most of the
heme proteins as a prosthetic group which bound with the protein matrix. It carries out
various functions including the diatomic gaseous ligand storage and transport,electron
transfer,oxidization,peroxidization,catalysis and signaling process and so on.For
investigating the active center, heme-iron-ligand complex,IR and visible RR spectroscopy
have revealed the heme environment structure and the ligand discrimination mechanism
for many heme proteins.Furthermore,electron paramagnetic resonance spectroscopy
and quantum mechanism study have been used to revealing the reaction mechanism of
heme enzyme.However, in any cases the accompanying conformational changes in
protein moiety always occur for regulating protein function as revealed by x-ray
crystallography. It appears quite important to establish a correlation between the active
center, heme,and the protein matrix for understanding the essential mechanism for
heme proteins. Also,this issue has attracted a lot of concerns from many fields. The
nature utilizes b type heme as the most common structure among the four kinds of hemes
that contain same framework but altered substitutions. Therefore, it is easy to propose
that the side chain of heme could play important role in regulation of protein structure
and function, and this propose is consistent with the discoveries from more and more
experimental data that side chains are involved in many reactions related with protein
functions. In this study, the interactions between heme and protein matrix as well as solvent leading
to intramolecular transduction of structural information and intermolecular energy transfer were
systematically investigated by using Mb. Those interactions include the covalent bond and the
hydrogen bonds between heme and globin and spatial collision between heme side chains and water
moleculs.
   In order to investigate the transmission of a binding slgnal of a gaseous ligand from the
ligand binding site?heme,to protein moiety in gas sensory heme proteins,we applied UVRR
spectroscopy to myoglobin as a model. UVRR spectroscopy is known as an excellent tool for
monitoring protein conformational changes. First of all,we determined the changes of conformation
in globin that occur upon binding of CO,NO,or O2to heme. Specifically,NO induces spectral
changes in Trp residues of A-helix that are significantly different from those induced by O2or CO
binding. On the other hand,binding of O2 to heme produces spectral changes in the Tyr residues of
H-helix that are difftrent from those induced by CO or NO binding. The UVRR results demonstrate
that the heme discriminates among different ligands by driving corresponding conformational changes
in the globin matrix. In order to explore the signaling pathway through His93 covalent bond,and 6-or
7-propionate hydrogen bonding network,we extended measurements to mutant-and heme-modified
Mbs in a similar way to native Mb, and investigated how they are responsible for transmitting
structural changes from ligand binding site--heme to globin for difftrent ligands. The experimental
results demonstrate that the cleavage of Fe-His93 covalent bond eliminates communication to the
C-terminal of the H-helix and that 7-propionate hydrogen-bonding network is essential for
transmitting the CO or NO binding signal to the N-and C-termini. Finally,6-propionate is important
only for NO binding. Thus,the hydrogen-bonding network in the protein appears to be critical for
intramolecular slgnal transduction in gas sensory heme proteins.
  Furthermore, pathway of vibrational energy dissipation from the heme to
surrounding protein matrix and solvent following CO photolysis in the fast time
component (≤10 ps)was investigated by using picosecond time-resolved anti-Stokes
Raman spectroscopy. The modified-and mutant Mbs,in which the 6- or 7-propionate is
selectively replaced by a methyl group or related hydrogen bonds is eliminated by
mutagenesis was used as model systems. The time constants of population decay of
vibrationally excited states for two modified Mbs became significantly larger compared
with those of native Mb.However the corresponding values of mutants are not different
from those of the native Mb.This work indicates that the two heme-propionate side
chains are highly involved in the energy transfer from the heme to solvent through the
collision with surrounding water molecules and contribute equally. But the hydrogen
bonding interactions with protein matrix seem to contribute scarcely to this fast energy
transfer process.This is the first experimental data estimating the contribution of
individual heme-propionate side chains to the vibrational energy transfer from the heme
to the surroundings., application/pdf, 総研大甲第1013号}, title = {Resonance Raman Investigation of Protein Dynamics Studies on Myoglobin: Information Transmission and Energy Funneling Mechanisms}, year = {} }