{"created":"2023-06-20T13:24:06.067330+00:00","id":5465,"links":{},"metadata":{"_buckets":{"deposit":"6a18b49a-d580-4fda-a0a8-1030987f3fa0"},"_deposit":{"created_by":24,"id":"5465","owners":[24],"pid":{"revision_id":0,"type":"depid","value":"5465"},"status":"published"},"_oai":{"id":"oai:ir.soken.ac.jp:00005465","sets":["1:275","1:448:291"]},"author_link":["6553","6549","6554","6556","6555","6550","6546","6547","6548","6552","6551"],"item_10001_biblio_info_7":{"attribute_name":"書誌情報","attribute_value_mlt":[{"bibliographicIssueDates":{"bibliographicIssueDate":"2014-08-11","bibliographicIssueDateType":"Issued"},"bibliographicIssueNumber":"8","bibliographicPageStart":"e104241","bibliographicVolumeNumber":"9","bibliographic_titles":[{"bibliographic_title":"PLoS ONE"},{"bibliographic_title":"PLoS ONE","bibliographic_titleLang":"en"}]}]},"item_10001_description_5":{"attribute_name":"抄録","attribute_value_mlt":[{"subitem_description":"The fission yeast Schizosaccharomyces pombe has been widely used as a model eukaryote to study a diverse range of biological processes. However, population genetic studies of this species have been limited to date, and we know very little about the evolutionary processes and selective pressures that are shaping its genome. Here, we sequenced the genomes of 32 worldwide S. pombe strains and examined the pattern of polymorphisms across their genomes. In addition to introns and untranslated regions (UTRs), intergenic regions also exhibited lower levels of nucleotide diversity than synonymous sites, suggesting that a considerable amount of noncoding DNA is under selective constraint and thus likely to be functional. A number of genomic regions showed a reduction of nucleotide diversity probably caused by selective sweeps. We also identified a region close to the end of chromosome 3 where an extremely high level of divergence was observed between 5 of the 32 strains and the remain 27, possibly due to introgression, strong positive selection, or that region being responsible for reproductive isolation. Our study should serve as an important starting point in using a population genomics approach to further elucidate the biology of this important model organism.","subitem_description_type":"Abstract"}]},"item_10001_publisher_8":{"attribute_name":"出版者","attribute_value_mlt":[{"subitem_publisher":"Public Library of Science / San Francisco, CA"}]},"item_10001_relation_13":{"attribute_name":"PubMed番号","attribute_value_mlt":[{"subitem_relation_type":"isIdenticalTo","subitem_relation_type_id":{"subitem_relation_type_id_text":"25111393","subitem_relation_type_select":"PMID"}}]},"item_10001_relation_14":{"attribute_name":"DOI","attribute_value_mlt":[{"subitem_relation_name":[{"subitem_relation_name_text":"10.1371/journal.pone.0104241 ＜PLoS ONE Open Access Full Text＞"}],"subitem_relation_type":"isIdenticalTo","subitem_relation_type_id":{"subitem_relation_type_id_text":"http://dx.doi.org/10.1371/journal.pone.0104241","subitem_relation_type_select":"DOI"}}]},"item_10001_relation_17":{"attribute_name":"関連サイト","attribute_value_mlt":[{"subitem_relation_name":[{"subitem_relation_name_text":"Article ＜PMC Free Full text＞ "}],"subitem_relation_type_id":{"subitem_relation_type_id_text":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4128662/","subitem_relation_type_select":"URI"}},{"subitem_relation_name":[{"subitem_relation_name_text":"Archive of PLoS ONE ＜PMC Journal List＞"}],"subitem_relation_type_id":{"subitem_relation_type_id_text":"https://www.ncbi.nlm.nih.gov/pmc/journals/440/","subitem_relation_type_select":"URI"}},{"subitem_relation_name":[{"subitem_relation_name_text":"About PLoS ONE ＜Public Library of Science＞"}],"subitem_relation_type_id":{"subitem_relation_type_id_text":"http://journals.plos.org/plosone/s/journal-information","subitem_relation_type_select":"URI"}}]},"item_10001_rights_31":{"attribute_name":"権利","attribute_value_mlt":[{"subitem_rights":"© 2014 Fawcett et al.　※ This is an open-access article distributed under the terms of the Creative Commons Attribution License. which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. | http://journals.plos.org/plosone/s/content-license"}]},"item_10001_source_id_26":{"attribute_name":"Online ISSN","attribute_value_mlt":[{"subitem_source_identifier":"1932-6203","subitem_source_identifier_type":"ISSN"}]},"item_10001_text_23":{"attribute_name":"著者注記","attribute_value_mlt":[{"subitem_text_value":"Jeffrey A. Fawcett : Graduate University for Advanced Studies"},{"subitem_text_value":"Shohei, Takuno : Graduate University for Advanced Studies"},{"subitem_text_value":"Tomoyuki, Kado : Graduate University for Advanced Studies"},{"subitem_text_value":"Hideki, Innan : Graduate University for Advanced Studies *(Associate Professor) "},{"subitem_text_value":"Ryuichi P, Sugino：Graduate University for Advanced Studies"}]},"item_10001_text_24":{"attribute_name":"PMC番号","attribute_value_mlt":[{"subitem_text_value":"PMC4128662"}]},"item_10001_text_25":{"attribute_name":"雑誌情報","attribute_value_mlt":[{"subitem_text_value":"Publication Start Year : 2006"},{"subitem_text_value":"Frequency : Monthly"},{"subitem_text_value":"A Peer-Reviewed, Open Access Journal, Electronic only "}]},"item_10001_text_28":{"attribute_name":"論文注記","attribute_value_mlt":[{"subitem_text_value":"Published online 2014 Aug 11."}]},"item_10001_version_type_20":{"attribute_name":"著者版フラグ","attribute_value_mlt":[{"subitem_version_resource":"http://purl.org/coar/version/c_970fb48d4fbd8a85","subitem_version_type":"VoR"}]},"item_creator":{"attribute_name":"著者","attribute_type":"creator","attribute_value_mlt":[{"creatorNames":[{"creatorName":"FAWCETT, Jeffrey A"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"IIDA, Tetsushi"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"TAKUNO, Shohei"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"SUGINO, Ryuichi P"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"KADO, Tomoyuki"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"KUGOU, Kazuto"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"MURA, Sachiko"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"KOBAYASHI, Takehiko"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"OHTA, Kunihiro"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"NAKAYAMA, Jun-ichi"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"INNAN, Hideki"}],"nameIdentifiers":[{}]}]},"item_files":{"attribute_name":"ファイル情報","attribute_type":"file","attribute_value_mlt":[{"accessrole":"open_date","date":[{"dateType":"Available","dateValue":"2016-12-22"}],"displaytype":"detail","filename":"file.pdf","filesize":[{"value":"890.6 kB"}],"format":"application/pdf","licensetype":"license_11","mimetype":"application/pdf","url":{"label":"本文 /Article","url":"https://ir.soken.ac.jp/record/5465/files/file.pdf"},"version_id":"e9139f8b-f6a9-4ea8-b93a-af95d8b9195f"}]},"item_keyword":{"attribute_name":"キーワード","attribute_value_mlt":[{"subitem_subject":"Gene Frequency","subitem_subject_language":"en","subitem_subject_scheme":"Other"},{"subitem_subject":"Genetic Variation","subitem_subject_language":"en","subitem_subject_scheme":"Other"},{"subitem_subject":"Genome, Fungal","subitem_subject_language":"en","subitem_subject_scheme":"Other"},{"subitem_subject":"Metagenomics","subitem_subject_language":"en","subitem_subject_scheme":"Other"},{"subitem_subject":"Schizosaccharomyces ＜NLM MeSH Terms＞","subitem_subject_language":"en","subitem_subject_scheme":"Other"}]},"item_language":{"attribute_name":"言語","attribute_value_mlt":[{"subitem_language":"eng"}]},"item_resource_type":{"attribute_name":"資源タイプ","attribute_value_mlt":[{"resourcetype":"journal article","resourceuri":"http://purl.org/coar/resource_type/c_6501"}]},"item_title":"Population genomics of the fission yeast Schizosaccharomyces pombe.","item_titles":{"attribute_name":"タイトル","attribute_value_mlt":[{"subitem_title":"Population genomics of the fission yeast Schizosaccharomyces pombe."},{"subitem_title":"Population genomics of the fission yeast Schizosaccharomyces pombe.","subitem_title_language":"en"}]},"item_type_id":"10001","owner":"24","path":["275","291"],"pubdate":{"attribute_name":"公開日","attribute_value":"2016-12-22"},"publish_date":"2016-12-22","publish_status":"0","recid":"5465","relation_version_is_last":true,"title":["Population genomics of the fission yeast Schizosaccharomyces pombe."],"weko_creator_id":"24","weko_shared_id":-1},"updated":"2023-06-20T15:04:46.363371+00:00"}