{"created":"2023-06-20T13:24:10.643812+00:00","id":5561,"links":{},"metadata":{"_buckets":{"deposit":"2899f59a-8cb7-42d7-9cbd-ced4df3842a9"},"_deposit":{"created_by":24,"id":"5561","owners":[24],"pid":{"revision_id":0,"type":"depid","value":"5561"},"status":"published"},"_oai":{"id":"oai:ir.soken.ac.jp:00005561","sets":["1:285"]},"author_link":["7025","7029","7033","7034","7031","7023","7024","7026","7028","7032","7027","7030"],"item_10001_biblio_info_7":{"attribute_name":"書誌情報","attribute_value_mlt":[{"bibliographicIssueDates":{"bibliographicIssueDate":"2016-09-22","bibliographicIssueDateType":"Issued"},"bibliographicIssueNumber":"9","bibliographicPageStart":"e0163456","bibliographicVolumeNumber":"11","bibliographic_titles":[{"bibliographic_title":"PLoS ONE"},{"bibliographic_title":"PLoS ONE","bibliographic_titleLang":"en"}]}]},"item_10001_creator_3":{"attribute_name":"著者別名","attribute_type":"creator","attribute_value_mlt":[{"creatorNames":[{"creatorName":"EIMIS, John A"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"LEE, Sang-Im"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"TOWNSEND, Andrea K"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"JABLONSKI, Piotr"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"NISHIUMI, Isao"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"SATTA, Yoko"}],"nameIdentifiers":[{}]}]},"item_10001_description_5":{"attribute_name":"抄録","attribute_value_mlt":[{"subitem_description":"A key characteristic of MHC genes is the persistence of allelic lineages over macroevolutionary periods, often through multiple speciation events. This phenomenon, known as trans-species polymorphism (TSP), is well documented in several major taxonomic groups, but has less frequently been observed in birds. The order Passeriformes is arguably the most successful terrestrial vertebrate order in terms of diversity of species and ecological range, but the reasons for this success remain unclear. Passerines exhibit the most highly duplicated MHC genes of any major vertebrate taxonomic group, which may generate increased immune response relative to other avian orders with fewer MHC loci. Here, we describe phylogenetic patterns of the MHC IIB in the passerine family Corvidae. Our results indicate wide-spread TSP within this family, with at least four supported MHC IIB allelic lineages that predate speciation by many millions of years. Markov chain Monte Carlo simulations indicate that divergence of these lineages occurred near the time of the divergence of the Passeriformes and other avian orders. We suggest that the current MHC diversity observed in passerines is due in part to the multiple duplication of a single MHC locus, DAB1, early in passerine evolution and that subsequent duplications of these paralogues have contributed to the enormous success of this order by increasing their ability to recognize and mount immune responses to novel pathogens.","subitem_description_type":"Abstract"}]},"item_10001_publisher_8":{"attribute_name":"出版者","attribute_value_mlt":[{"subitem_publisher":"Public Library of Science / San Francisco, CA "}]},"item_10001_relation_13":{"attribute_name":"PubMed番号","attribute_value_mlt":[{"subitem_relation_type":"isIdenticalTo","subitem_relation_type_id":{"subitem_relation_type_id_text":"27658204","subitem_relation_type_select":"PMID"}}]},"item_10001_relation_14":{"attribute_name":"DOI","attribute_value_mlt":[{"subitem_relation_name":[{"subitem_relation_name_text":"10.1371/journal.pone.0163456 ＜PLoS ONE Open Access Full Text＞"}],"subitem_relation_type":"isIdenticalTo","subitem_relation_type_id":{"subitem_relation_type_id_text":"https://doi.org/10.1371/journal.pone.0163456","subitem_relation_type_select":"DOI"}}]},"item_10001_relation_17":{"attribute_name":"関連サイト","attribute_value_mlt":[{"subitem_relation_name":[{"subitem_relation_name_text":"Article ＜PMC FREE Full text＞ "}],"subitem_relation_type_id":{"subitem_relation_type_id_text":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5033386/","subitem_relation_type_select":"URI"}},{"subitem_relation_name":[{"subitem_relation_name_text":"Archive of PLoS ONE ＜PMC Journal List＞ "}],"subitem_relation_type_id":{"subitem_relation_type_id_text":"https://www.ncbi.nlm.nih.gov/pmc/journals/440/","subitem_relation_type_select":"URI"}},{"subitem_relation_name":[{"subitem_relation_name_text":"About PLoS ONE ＜Public Library of Science＞"}],"subitem_relation_type_id":{"subitem_relation_type_id_text":"http://journals.plos.org/plosone/","subitem_relation_type_select":"URI"}}]},"item_10001_rights_15":{"attribute_name":"権利","attribute_value_mlt":[{"subitem_rights":"© 2016 Eimes et al. "},{"subitem_rights":"※ This is an open-access article distributed under the terms of the Creative Commons Attribution License. which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. "}]},"item_10001_source_id_26":{"attribute_name":"Online ISSN","attribute_value_mlt":[{"subitem_source_identifier":"1932-6203","subitem_source_identifier_type":"ISSN"}]},"item_10001_text_23":{"attribute_name":"著者注記","attribute_value_mlt":[{"subitem_text_value":"Yoko, Satta：The Graduate University for Advanced Studies, Department of Evolutionary Studies of Biosystems *(Professor)"}]},"item_10001_text_24":{"attribute_name":"PMC番号","attribute_value_mlt":[{"subitem_text_value":"PMC5033386"}]},"item_10001_text_25":{"attribute_name":"雑誌情報","attribute_value_mlt":[{"subitem_text_value":"Publication Start Year : 2006 "},{"subitem_text_value":"Frequency : Monthly"},{"subitem_text_value":"A Peer-Reviewed, Open Access Journal, Electronic only"}]},"item_10001_version_type_20":{"attribute_name":"著者版フラグ","attribute_value_mlt":[{"subitem_version_resource":"http://purl.org/coar/version/c_970fb48d4fbd8a85","subitem_version_type":"VoR"}]},"item_creator":{"attribute_name":"著者","attribute_type":"creator","attribute_value_mlt":[{"creatorNames":[{"creatorName":"EIMIS, John A"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"LEE, Sang-Im"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"TOWNSEND, Andrea K"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"JABLONSKI, Piotr"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"NISHIUMI, Isao"}],"nameIdentifiers":[{}]},{"creatorNames":[{"creatorName":"SATTA, Yoko"}],"nameIdentifiers":[{}]}]},"item_files":{"attribute_name":"ファイル情報","attribute_type":"file","attribute_value_mlt":[{"accessrole":"open_date","date":[{"dateType":"Available","dateValue":"2017-08-02"}],"displaytype":"detail","filename":"PLoS ONE 11(9) e0163456file.pdf","filesize":[{"value":"2.9 MB"}],"format":"application/pdf","licensetype":"license_11","mimetype":"application/pdf","url":{"label":"本文 / Article","url":"https://ir.soken.ac.jp/record/5561/files/PLoS ONE 11(9) e0163456file.pdf"},"version_id":"94fbfaf3-3a3a-4622-b7ce-5a40f2175287"}]},"item_language":{"attribute_name":"言語","attribute_value_mlt":[{"subitem_language":"eng"}]},"item_resource_type":{"attribute_name":"資源タイプ","attribute_value_mlt":[{"resourcetype":"journal article","resourceuri":"http://purl.org/coar/resource_type/c_6501"}]},"item_title":"Early Duplication of a Single MHC IIB Locus Prior to the Passerine Radiations.","item_titles":{"attribute_name":"タイトル","attribute_value_mlt":[{"subitem_title":"Early Duplication of a Single MHC IIB Locus Prior to the Passerine Radiations."},{"subitem_title":"Early Duplication of a Single MHC IIB Locus Prior to the Passerine Radiations.","subitem_title_language":"en"}]},"item_type_id":"10001","owner":"24","path":["285"],"pubdate":{"attribute_name":"公開日","attribute_value":"2017-08-02"},"publish_date":"2017-08-02","publish_status":"0","recid":"5561","relation_version_is_last":true,"title":["Early Duplication of a Single MHC IIB Locus Prior to the Passerine Radiations."],"weko_creator_id":"24","weko_shared_id":-1},"updated":"2023-06-20T15:03:56.147773+00:00"}