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  1. 010 学術雑誌論文
  2. 寺井, 洋平 / TERAI, Yohei
  1. 000 著者一覧
  2. 寺井, 洋平 / TERAI, Yohei

A novel family of short interspersed repetitive elements (SINEs) from cichlids: the insertion patterns of SINEs at orthologous loci support monophyly of four major groups of these fishes in Lake Tanganyika

https://ir.soken.ac.jp/records/4647
https://ir.soken.ac.jp/records/4647
add3d287-ff01-421a-8cb5-3e9bb1d6e40e
Item type 学術雑誌論文 / Journal Article(1)
公開日 2014-06-11
タイトル
タイトル A novel family of short interspersed repetitive elements (SINEs) from cichlids: the insertion patterns of SINEs at orthologous loci support monophyly of four major groups of these fishes in Lake Tanganyika
タイトル
タイトル A novel family of short interspersed repetitive elements (SINEs) from cichlids: the insertion patterns of SINEs at orthologous loci support monophyly of four major groups of these fishes in Lake Tanganyika
言語 en
言語
言語 eng
資源タイプ
資源タイプ識別子 http://purl.org/coar/resource_type/c_6501
資源タイプ journal article
アクセス権
アクセス権 metadata only access
アクセス権URI http://purl.org/coar/access_right/c_14cb
著者 TAKAHASHI, Kenji

× TAKAHASHI, Kenji

TAKAHASHI, Kenji

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TERAI, Yohey

× TERAI, Yohey

TERAI, Yohey

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NISHIDA, Mutsumi

× NISHIDA, Mutsumi

NISHIDA, Mutsumi

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OKADA, Norihiro

× OKADA, Norihiro

OKADA, Norihiro

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著者別名 寺井, 洋平

× 寺井, 洋平

寺井, 洋平

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抄録
内容記述タイプ Abstract
内容記述 Short interspersed repetitive elements (SINEs) have been shown to be excellent markers of molecular phylogeny, since the integration of a SINE at a particular position in a genome can be considered an unambiguous derived homologous character. In the present study, we isolated a new family of SINEs from cichlids in Lake Tanganyika, whose speciation and diversification have been regarded as prime examples of explosive adaptive radiation. Members of this new SINE family, which we named the AFC family, are about 320 bp in length, and each has a tRNA-related region in its 5' region, as do most of the members of SINE families reported to date. A dot blot hybridization experiment showed that this family is distributed extensively in the genomes of cichlids in Africa, with estimated copy numbers of 2 x 10(3)-2 x 10(4) per haploid genome. Our investigations of the patterns of insertion of members of this family at six orthologous loci demonstrated clearly that four previously identified tribes, namely, the Lamprologini, Ectodini, Tropheini, and Perissodini, each form a monophyletic group. These results provide a basis for the elucidation of the phylogenetic framework of the cichlid fishes in Lake Tanganyika.
書誌情報 Molecular Biology and Evolution
en : Molecular Biology and Evolution

巻 15, 号 4, p. 391-407, 発行日 1998
出版者
出版者 Oxford University Press
ISSN
収録物識別子タイプ ISSN
収録物識別子 0737-4038
DOI
識別子タイプ DOI
関連識別子 https://doi.org/10.1093/oxfordjournals.molbev.a025936
関連名称 10.1093/oxfordjournals.molbev.a025936
権利
権利情報 © 1998 by the Society for Molecular Biology and Evolution
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