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  1. 010 学術雑誌論文
  2. 颯田, 葉子 / SATTA, Yoko
  1. 010 学術雑誌論文
  2. 寺井, 洋平 / TERAI, Yohei
  1. 010 学術雑誌論文
  2. 02 学生発表論文
  3. ダルマヤンティ,アニク ブディ / DHARMAYANTHI, Anik Budhi

The origin and evolution of fibromelanosis in domesticated chickens: Genomic comparison of Indonesian Cemani and Chinese Silkie breeds.

https://ir.soken.ac.jp/records/5634
https://ir.soken.ac.jp/records/5634
dca4f7ac-2c52-4a4e-b414-b9e23b2256df
名前 / ファイル ライセンス アクション
anikfile.pdf 本文 / Article (3.1 MB)
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Item type 学術雑誌論文 / Journal Article(1)
公開日 2017-07-19
タイトル
タイトル The origin and evolution of fibromelanosis in domesticated chickens: Genomic comparison of Indonesian Cemani and Chinese Silkie breeds.
タイトル
タイトル The origin and evolution of fibromelanosis in domesticated chickens: Genomic comparison of Indonesian Cemani and Chinese Silkie breeds.
言語 en
言語
言語 eng
資源タイプ
資源タイプ識別子 http://purl.org/coar/resource_type/c_6501
資源タイプ journal article
著者 DHARMAYANTHI, Anik Budhi

× DHARMAYANTHI, Anik Budhi

DHARMAYANTHI, Anik Budhi

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TERAI, Yohei

× TERAI, Yohei

TERAI, Yohei

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SULANDARI, Sri

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SULANDARI, Sri

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ZEIN, M Syamsul Arifin

× ZEIN, M Syamsul Arifin

ZEIN, M Syamsul Arifin

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AKIYAMA, Toyoko

× AKIYAMA, Toyoko

AKIYAMA, Toyoko

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SATTA, Yoko

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SATTA, Yoko

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著者別名 DHARMAYANTHI, Anik Budhi

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DHARMAYANTHI, Anik Budhi

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TERAI, Yohei

× TERAI, Yohei

TERAI, Yohei

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SULANDARI, Sri

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SULANDARI, Sri

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ZEIN, M Syamsul Arifin

× ZEIN, M Syamsul Arifin

ZEIN, M Syamsul Arifin

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AKIYAMA, Toyoko

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AKIYAMA, Toyoko

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SATTA, Yoko

× SATTA, Yoko

SATTA, Yoko

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著者注記
Anik Budhi, Dharmayanthi:Department of Evolutionary Studies of Biosystems, SOKENDAI (The Graduate University for Advanced Studies)
著者注記
Yohei, Terai:Department of Evolutionary Studies of Biosystems, SOKENDAI (The Graduate University for Advanced Studies) *(Assistant Professor)
著者注記
Yoko, Satta:Department of Evolutionary Studies of Biosystems, SOKENDAI (The Graduate University for Advanced Studies) *(Professor)
抄録
内容記述タイプ Abstract
内容記述 Like Chinese Silkie, Indonesian Ayam Cemani exhibits fibromelanosis or dermal hyperpigmentation and possesses complex segmental duplications on chromosome 20 that involve the endothelin 3 gene, EDN3. A genomic region, DR1 of 127 kb, together with another region, DR2 of 171 kb, was duplicated by unequal crossing over, accompanied by inversion of one DR2. Quantitative PCR and copy number variation analyses on the Cemani genome sequence confirmed the duplication of EDN3. These genetic arrangements are identical in Cemani and Silkie, indicating a single origin of the genetic cause of Fm. The two DR1s harbor two distinct EDN3 haplotypes in a form of permanent heterozygosity, although they remain allelic in the ancestral Red Jungle Fowl population and some domesticated chicken breeds, with their allelic divergence time being as recent as 0.3 million years ago. In Cemani and Silkie breeds, artificial selection favoring the Fm phenotype has left an unambiguous record for selective sweep that extends in both directions from tandemly duplicated EDN3 loci. This highly homozygous tract is different in length between Cemani and Silkie, reflecting their distinct breeding histories. It is estimated that the Fm phenotype came into existence at least 6600-9100 years ago, prior to domestication of Cemani and Silkie, and that throughout domestication there has been intense artificial selection with strength s > 50% in each breed.
書誌情報 PLoS ONE
en : PLoS ONE

巻 12, 号 4, p. e0173147, 発行日 2017-04-05
雑誌情報
Publication Start Year : 2006
雑誌情報
Frequency : Monthly
雑誌情報
A Peer-Reviewed, Open Access Journal, Electronic only
出版者
出版者 Public Library of Science / San Francisco, CA
Online ISSN
収録物識別子タイプ ISSN
収録物識別子 1932-6203
PubMed番号
28379963
https://www.ncbi.nlm.nih.gov/pubmed/?term=28379963
PMC番号
PMC5381777
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5381777/
DOI
関連タイプ isIdenticalTo
識別子タイプ DOI
関連識別子 http://dx.doi.org/10.1371/journal.pone.0173147
関連名称 10.1371/journal.pone.0173147 <PLoS ONE Open Access Full Text>
権利
権利情報 © 2017 Dharmayanthi et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. | http://journals.plos.org/plosone/s/licenses-and-copyright
関連サイト
識別子タイプ URI
関連識別子 https://www.ncbi.nlm.nih.gov/pmc/journals/440/
関連名称 Archive of PLoS ONE <PMC Journal List>
関連サイト
識別子タイプ URI
関連識別子 http://journals.plos.org/plosone/s/journal-information
関連名称 About PLoS ONE <Public Library of Science>
著者版フラグ
出版タイプ VoR
出版タイプResource http://purl.org/coar/version/c_970fb48d4fbd8a85
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